Carnation DB

Dca26567.1

Annotation

8-exons
f-3
sp|D7L1X8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_480822#GO:0016021;GO:0005524;GO:0043682;GO:0046872;GO:0006754#3F1P1C
AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | chr4:14720253-14724577 REVERSE LENGTH=951
Repeat List (scaffold264)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26567.1	1	760	951	48.15	760	58	0
Target_name	Start	End	Length	Cov(%)
sp\|D7L1X8_ARALL	73	871	1175	68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26567.1	1	951	951	52.15	951	52	0
Target_name	Start	End	Length	Cov(%)
AT4G30110.1	63	951	951	93.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold264	Augustus	mRNA	6395	9836	.	+	.	ID=Dca26567.1;Parent=Dca26567
scaffold264	Augustus	exon	6395	6652	.	+	.	ID=Dca26567.1.exon1;Parent=Dca26567.1
scaffold264	Augustus	exon	6747	6844	.	+	.	ID=Dca26567.1.exon2;Parent=Dca26567.1
scaffold264	Augustus	exon	6929	7184	.	+	.	ID=Dca26567.1.exon3;Parent=Dca26567.1
scaffold264	Augustus	exon	7271	7408	.	+	.	ID=Dca26567.1.exon4;Parent=Dca26567.1
scaffold264	Augustus	exon	7483	7810	.	+	.	ID=Dca26567.1.exon5;Parent=Dca26567.1
scaffold264	Augustus	exon	7896	8098	.	+	.	ID=Dca26567.1.exon6;Parent=Dca26567.1
scaffold264	Augustus	exon	8190	8386	.	+	.	ID=Dca26567.1.exon7;Parent=Dca26567.1
scaffold264	Augustus	exon	8457	9836	.	+	.	ID=Dca26567.1.exon8;Parent=Dca26567.1