Carnation DB

Dca26572.1

Annotation

5-exons
f-1
sp|F6HEF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g01910#GO:0003824;GO:0009116#1F1P0C
Os06t0112100-01 Nucleoside phosphorylase, family 1 domain containing protein.
Repeat List (scaffold264)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26572.1	11	311	320	39.68	301	40	8e-55
Target_name	Start	End	Length	Cov(%)
sp\|F6HEF1_VITVI	70	385	394	80.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26572.1	25	311	320	32.81	287	35	1e-44
Target_name	Start	End	Length	Cov(%)
Os06t0112100-01	26	329	344	88.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold264	Augus-PASA	mRNA	62958	65063	.	-	.	ID=Dca26572.1;Parent=Dca26572
scaffold264	Augus-PASA	exon	62958	63125	.	-	.	ID=Dca26572.1.exon1;Parent=Dca26572.1
scaffold264	Augus-PASA	exon	63569	63910	.	-	.	ID=Dca26572.1.exon2;Parent=Dca26572.1
scaffold264	Augus-PASA	exon	64025	64180	.	-	.	ID=Dca26572.1.exon3;Parent=Dca26572.1
scaffold264	Augus-PASA	exon	64359	64426	.	-	.	ID=Dca26572.1.exon4;Parent=Dca26572.1
scaffold264	Augus-PASA	exon	64835	65063	.	-	.	ID=Dca26572.1.exon5;Parent=Dca26572.1