Dca26708.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2653)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26708.1 |
185 |
482 |
490 |
38.57 |
298 |
64 |
3e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
13 |
310 |
964 |
30.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26708.1 |
251 |
482 |
490 |
19.79 |
232 |
42 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
725 |
1428 |
16.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2653 |
Augustus |
mRNA |
43920 |
46716 |
. |
+ |
. |
ID=Dca26708.1;Parent=Dca26708 |
| scaffold2653 |
Augustus |
exon |
43920 |
44473 |
. |
+ |
. |
ID=Dca26708.1.exon1;Parent=Dca26708.1 |
| scaffold2653 |
Augustus |
exon |
45798 |
46716 |
. |
+ |
. |
ID=Dca26708.1.exon2;Parent=Dca26708.1 |
