Carnation DB

Dca26817.1

Annotation

5-exons
f-1
sp|B9S3X9_RICCO#U1 small nuclear ribonucleoprotein C, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0556840#GO:0005634;GO:0030529;GO:0003676;GO:0008270#2F0P2C
Repeat List (scaffold2665)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26817.1	1	183	225	49.77	183	58	1e-39
Target_name	Start	End	Length	Cov(%)
sp\|B9S3X9_RICCO	1	190	206	92.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26817.1	1	134	225	39.55	134	63	1e-36
Target_name	Start	End	Length	Cov(%)
Os02t0266100-02	1	140	229	61.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2665	Augustus	mRNA	41869	44925	.	-	.	ID=Dca26817.1;Parent=Dca26817
scaffold2665	Augustus	exon	41869	42203	.	-	.	ID=Dca26817.1.exon1;Parent=Dca26817.1
scaffold2665	Augustus	exon	43250	43499	.	-	.	ID=Dca26817.1.exon2;Parent=Dca26817.1
scaffold2665	Augustus	exon	43607	43648	.	-	.	ID=Dca26817.1.exon3;Parent=Dca26817.1
scaffold2665	Augustus	exon	44738	44780	.	-	.	ID=Dca26817.1.exon4;Parent=Dca26817.1
scaffold2665	Augustus	exon	44918	44925	.	-	.	ID=Dca26817.1.exon5;Parent=Dca26817.1