Carnation DB

Dca26819.1

Annotation

5-exons
f-1
sp|B9S3X9_RICCO#U1 small nuclear ribonucleoprotein C, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0556840#GO:0005634;GO:0030529;GO:0003676;GO:0008270#2F0P2C
Repeat List (scaffold2665)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26819.1	1	183	225	49.77	183	58	1e-39
Target_name	Start	End	Length	Cov(%)
sp\|B9S3X9_RICCO	1	190	206	92.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26819.1	1	134	225	39.55	134	63	1e-36
Target_name	Start	End	Length	Cov(%)
Os02t0266100-02	1	140	229	61.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2665	Augus-PASA	mRNA	56493	59542	.	-	.	ID=Dca26819.1;Parent=Dca26819
scaffold2665	Augus-PASA	exon	56493	56827	.	-	.	ID=Dca26819.1.exon1;Parent=Dca26819.1
scaffold2665	Augus-PASA	exon	57869	58118	.	-	.	ID=Dca26819.1.exon2;Parent=Dca26819.1
scaffold2665	Augus-PASA	exon	58226	58267	.	-	.	ID=Dca26819.1.exon3;Parent=Dca26819.1
scaffold2665	Augus-PASA	exon	59355	59397	.	-	.	ID=Dca26819.1.exon4;Parent=Dca26819.1
scaffold2665	Augus-PASA	exon	59535	59542	.	-	.	ID=Dca26819.1.exon5;Parent=Dca26819.1