Carnation DB

Dca26883.1

Annotation

14-exons
f-1
sp|B9IFP6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1103893#GO:0005634;GO:0003677;GO:0006355#1F1P1C
sp|B9S0I6_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1355220#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold2672)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26883.1	94	326	906	16	233	58	2e-68
Target_name	Start	End	Length	Cov(%)
sp\|B9IFP6_POPTR	15	257	753	32.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26883.1	106	311	906	13.13	206	53	7e-59
Target_name	Start	End	Length	Cov(%)
AT2G36960.3	31	256	744	30.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2672	Augustus	mRNA	2319	13975	.	+	.	ID=Dca26883.1;Parent=Dca26883
scaffold2672	Augustus	exon	2319	2441	.	+	.	ID=Dca26883.1.exon1;Parent=Dca26883.1
scaffold2672	Augustus	exon	4223	4466	.	+	.	ID=Dca26883.1.exon2;Parent=Dca26883.1
scaffold2672	Augustus	exon	4557	4630	.	+	.	ID=Dca26883.1.exon3;Parent=Dca26883.1
scaffold2672	Augustus	exon	4860	4969	.	+	.	ID=Dca26883.1.exon4;Parent=Dca26883.1
scaffold2672	Augustus	exon	10120	10204	.	+	.	ID=Dca26883.1.exon5;Parent=Dca26883.1
scaffold2672	Augustus	exon	10292	10571	.	+	.	ID=Dca26883.1.exon6;Parent=Dca26883.1
scaffold2672	Augustus	exon	10989	11137	.	+	.	ID=Dca26883.1.exon7;Parent=Dca26883.1
scaffold2672	Augustus	exon	11569	11797	.	+	.	ID=Dca26883.1.exon8;Parent=Dca26883.1
scaffold2672	Augustus	exon	11888	11994	.	+	.	ID=Dca26883.1.exon9;Parent=Dca26883.1
scaffold2672	Augustus	exon	12080	12318	.	+	.	ID=Dca26883.1.exon10;Parent=Dca26883.1
scaffold2672	Augustus	exon	12411	12717	.	+	.	ID=Dca26883.1.exon11;Parent=Dca26883.1
scaffold2672	Augustus	exon	12923	13315	.	+	.	ID=Dca26883.1.exon12;Parent=Dca26883.1
scaffold2672	Augustus	exon	13473	13598	.	+	.	ID=Dca26883.1.exon13;Parent=Dca26883.1
scaffold2672	Augustus	exon	13721	13975	.	+	.	ID=Dca26883.1.exon14;Parent=Dca26883.1