Carnation DB

Dca26972.1

Annotation

8-exons
f-1
sp|C5YWF3_SORBI#Putative uncharacterized protein Sb09g029620#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb09g029620#GO:0005524;GO:0004386#2F0P0C
Os04t0357300-01 Similar to Helicase-like protein [Oryza sativa (japonica cultivar-group)].
Repeat List (scaffold2683)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26972.1	1	228	442	22.85	228	45	5e-50
Target_name	Start	End	Length	Cov(%)
sp\|C5YWF3_SORBI	740	967	1108	20.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26972.1	1	228	442	22.17	228	43	7e-50
Target_name	Start	End	Length	Cov(%)
Os04t0357300-01	186	413	442	51.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2683	Augustus	mRNA	15622	19525	.	+	.	ID=Dca26972.1;Parent=Dca26972
scaffold2683	Augustus	exon	15622	16297	.	+	.	ID=Dca26972.1.exon1;Parent=Dca26972.1
scaffold2683	Augustus	exon	17226	17374	.	+	.	ID=Dca26972.1.exon2;Parent=Dca26972.1
scaffold2683	Augustus	exon	17481	17748	.	+	.	ID=Dca26972.1.exon3;Parent=Dca26972.1
scaffold2683	Augustus	exon	17834	17936	.	+	.	ID=Dca26972.1.exon4;Parent=Dca26972.1
scaffold2683	Augustus	exon	18046	18098	.	+	.	ID=Dca26972.1.exon5;Parent=Dca26972.1
scaffold2683	Augustus	exon	18283	18361	.	+	.	ID=Dca26972.1.exon6;Parent=Dca26972.1
scaffold2683	Augustus	exon	18454	18565	.	+	.	ID=Dca26972.1.exon7;Parent=Dca26972.1
scaffold2683	Augustus	exon	19151	19525	.	+	.	ID=Dca26972.1.exon8;Parent=Dca26972.1