Carnation DB

Dca27009.1

Annotation

6-exons
f-1
sp|B9HUD3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_726410#unknown#0F0P0C
Os01t0727400-01 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 domain containing protein.
Repeat List (scaffold2688)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27009.1	43	233	233	69.09	191	78	3e-92
Target_name	Start	End	Length	Cov(%)
sp\|B9HUD3_POPTR	18	225	225	92.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27009.1	43	232	233	64.37	190	72	3e-88
Target_name	Start	End	Length	Cov(%)
Os01t0727400-01	18	228	230	91.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2688	Augustus	mRNA	39165	41890	.	-	.	ID=Dca27009.1;Parent=Dca27009
scaffold2688	Augustus	exon	39165	39353	.	-	.	ID=Dca27009.1.exon1;Parent=Dca27009.1
scaffold2688	Augustus	exon	39595	39693	.	-	.	ID=Dca27009.1.exon2;Parent=Dca27009.1
scaffold2688	Augustus	exon	39765	39845	.	-	.	ID=Dca27009.1.exon3;Parent=Dca27009.1
scaffold2688	Augustus	exon	40262	40353	.	-	.	ID=Dca27009.1.exon4;Parent=Dca27009.1
scaffold2688	Augustus	exon	41405	41558	.	-	.	ID=Dca27009.1.exon5;Parent=Dca27009.1
scaffold2688	Augustus	exon	41804	41890	.	-	.	ID=Dca27009.1.exon6;Parent=Dca27009.1