Carnation DB

Dca27029.1

Annotation

13-exons
f-1
sp|D7KBN3_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_680475#unknown#0F0P0C
sp|Q8VYQ4_ARATH#At1g24265/At1g24265#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At1g24265#unknown#0F0P0C
Repeat List (scaffold269)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27029.1	1	293	362	37.84	293	46	9e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7KBN3_ARALL	1	297	349	85.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27029.1	1	317	362	41.71	317	46	1e-64
Target_name	Start	End	Length	Cov(%)
AT1G24267.2	1	315	344	91.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold269	Augus-PASA	mRNA	146987	154059	.	-	.	ID=Dca27029.1;Parent=Dca27029
scaffold269	Augus-PASA	exon	146987	147244	.	-	.	ID=Dca27029.1.exon1;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	148132	148188	.	-	.	ID=Dca27029.1.exon2;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	148666	148725	.	-	.	ID=Dca27029.1.exon3;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	148921	148998	.	-	.	ID=Dca27029.1.exon4;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	149106	149138	.	-	.	ID=Dca27029.1.exon5;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	149240	149314	.	-	.	ID=Dca27029.1.exon6;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	149782	149871	.	-	.	ID=Dca27029.1.exon7;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	150683	150784	.	-	.	ID=Dca27029.1.exon8;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	151565	151629	.	-	.	ID=Dca27029.1.exon9;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	151934	152009	.	-	.	ID=Dca27029.1.exon10;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	152464	152541	.	-	.	ID=Dca27029.1.exon11;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	152888	152961	.	-	.	ID=Dca27029.1.exon12;Parent=Dca27029.1
scaffold269	Augus-PASA	exon	154017	154059	.	-	.	ID=Dca27029.1.exon13;Parent=Dca27029.1