Carnation DB

Dca27110.1

Annotation

9-exons
f-1
sp|A5BLS1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012026#unknown#0F0P0C
sp|B9H5I6_POPTR#Bromodomain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=BRD902#unknown#0F0P0C
Repeat List (scaffold27)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27110.1	35	708	708	39.97	674	38	2e-85
Target_name	Start	End	Length	Cov(%)
sp\|A5BLS1_VITVI	3	688	688	99.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27110.1	35	606	708	31.07	572	36	3e-68
Target_name	Start	End	Length	Cov(%)
AT1G20670.1	11	567	652	85.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold27	Augustus	mRNA	71945	76032	.	+	.	ID=Dca27110.1;Parent=Dca27110
scaffold27	Augustus	exon	71945	72430	.	+	.	ID=Dca27110.1.exon1;Parent=Dca27110.1
scaffold27	Augustus	exon	73138	73174	.	+	.	ID=Dca27110.1.exon2;Parent=Dca27110.1
scaffold27	Augustus	exon	73390	73498	.	+	.	ID=Dca27110.1.exon3;Parent=Dca27110.1
scaffold27	Augustus	exon	73604	73649	.	+	.	ID=Dca27110.1.exon4;Parent=Dca27110.1
scaffold27	Augustus	exon	73764	73895	.	+	.	ID=Dca27110.1.exon5;Parent=Dca27110.1
scaffold27	Augustus	exon	74429	74497	.	+	.	ID=Dca27110.1.exon6;Parent=Dca27110.1
scaffold27	Augustus	exon	74574	74916	.	+	.	ID=Dca27110.1.exon7;Parent=Dca27110.1
scaffold27	Augustus	exon	75048	75202	.	+	.	ID=Dca27110.1.exon8;Parent=Dca27110.1
scaffold27	Augus-PASA	exon	75283	76032	.	+	.	ID=Dca27110.1.exon9;Parent=Dca27110.1