Carnation DB

Dca27148.1

Annotation

5-exons
f-1
sp|F6H1M5_VITVI#DNA-directed RNA polymerase subunit#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14650#GO:0005634;GO:0003899;GO:0003676;GO:0008270#3F0P1C
Repeat List (scaffold27)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27148.1	1	109	109	48.62	109	49	1e-26
Target_name	Start	End	Length	Cov(%)
sp\|F6H1M5_VITVI	1	109	109	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27148.1	1	108	109	45.87	108	46	1e-23
Target_name	Start	End	Length	Cov(%)
Os03t0711700-00	18	125	127	85.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold27	Augus-PASA	mRNA	368323	372168	.	+	.	ID=Dca27148.1;Parent=Dca27148
scaffold27	Augus-PASA	exon	368323	368389	.	+	.	ID=Dca27148.1.exon1;Parent=Dca27148.1
scaffold27	Augus-PASA	exon	369488	369528	.	+	.	ID=Dca27148.1.exon2;Parent=Dca27148.1
scaffold27	Augus-PASA	exon	371737	371820	.	+	.	ID=Dca27148.1.exon3;Parent=Dca27148.1
scaffold27	Augus-PASA	exon	371939	371998	.	+	.	ID=Dca27148.1.exon4;Parent=Dca27148.1
scaffold27	Augus-PASA	exon	372091	372168	.	+	.	ID=Dca27148.1.exon5;Parent=Dca27148.1