Carnation DB

Dca27153.1

Annotation

7-exons
f-1
sp|D7TPA8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g00550#GO:0005525#1F0P0C
sp|B9S422_RICCO#Nucleolar GTP-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0557790#GO:0005525#1F0P0C
Repeat List (scaffold27)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27153.1	95	391	392	62.75	297	83	5e-149
Target_name	Start	End	Length	Cov(%)
sp\|D7TPA8_VITVI	70	366	367	80.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27153.1	99	391	392	58.16	293	78	4e-139
Target_name	Start	End	Length	Cov(%)
Os05t0430400-01	78	370	372	78.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold27	Augus-PASA	mRNA	408707	412972	.	-	.	ID=Dca27153.1;Parent=Dca27153
scaffold27	Augus-PASA	exon	408707	408830	.	-	.	ID=Dca27153.1.exon1;Parent=Dca27153.1
scaffold27	Augus-PASA	exon	409088	409145	.	-	.	ID=Dca27153.1.exon2;Parent=Dca27153.1
scaffold27	Augus-PASA	exon	409747	409928	.	-	.	ID=Dca27153.1.exon3;Parent=Dca27153.1
scaffold27	Augustus	exon	410644	410759	.	-	.	ID=Dca27153.1.exon4;Parent=Dca27153.1
scaffold27	Augus-PASA	exon	412089	412175	.	-	.	ID=Dca27153.1.exon5;Parent=Dca27153.1
scaffold27	Augus-PASA	exon	412263	412523	.	-	.	ID=Dca27153.1.exon6;Parent=Dca27153.1
scaffold27	Augus-PASA	exon	412622	412972	.	-	.	ID=Dca27153.1.exon7;Parent=Dca27153.1