Dca27213.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2705)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27213.1 |
342 |
514 |
514 |
24.12 |
173 |
72 |
7e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
629 |
801 |
896 |
19.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27213.1 |
344 |
514 |
514 |
12.25 |
171 |
37 |
7e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1140 |
1303 |
1401 |
11.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2705 |
Augustus |
mRNA |
1 |
4000 |
. |
- |
. |
ID=Dca27213.1;Parent=Dca27213 |
| scaffold2705 |
Augustus |
exon |
1 |
515 |
. |
- |
. |
ID=Dca27213.1.exon1;Parent=Dca27213.1 |
| scaffold2705 |
Augustus |
exon |
2864 |
3360 |
. |
- |
. |
ID=Dca27213.1.exon2;Parent=Dca27213.1 |
| scaffold2705 |
Augustus |
exon |
3471 |
4000 |
. |
- |
. |
ID=Dca27213.1.exon3;Parent=Dca27213.1 |
