Dca27242.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold27087)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27242.1 |
2 |
375 |
375 |
66.93 |
374 |
59 |
5e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
494 |
889 |
1501 |
26.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27242.1 |
3 |
371 |
375 |
42.4 |
369 |
38 |
2e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
183 |
574 |
707 |
55.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold27087 |
Augustus |
mRNA |
1 |
1371 |
. |
- |
. |
ID=Dca27242.1;Parent=Dca27242 |
| scaffold27087 |
Augustus |
exon |
1 |
292 |
. |
- |
. |
ID=Dca27242.1.exon1;Parent=Dca27242.1 |
| scaffold27087 |
Augustus |
exon |
442 |
779 |
. |
- |
. |
ID=Dca27242.1.exon2;Parent=Dca27242.1 |
| scaffold27087 |
Augustus |
exon |
877 |
1371 |
. |
- |
. |
ID=Dca27242.1.exon3;Parent=Dca27242.1 |
