Carnation DB

Dca27252.1

Annotation

9-exons
f-1
sp|B9N6A3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_271547#GO:0005622;GO:0005525;GO:0003924;GO:0008270#3F0P1C
AT5G10630.2 | Symbols: | Translation elongation factor EF1A/initiation factor IF2gamma family protein | chr5:3360561-3364414 FORWARD LENGTH=668
Repeat List (scaffold271)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27252.1	56	663	663	57.16	608	62	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N6A3_POPTR	43	624	658	88.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27252.1	52	663	663	52.18	612	56	0
Target_name	Start	End	Length	Cov(%)
AT5G10630.2	48	633	668	87.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold271	Augustus	mRNA	15985	22013	.	+	.	ID=Dca27252.1;Parent=Dca27252
scaffold271	Augustus	exon	15985	16105	.	+	.	ID=Dca27252.1.exon1;Parent=Dca27252.1
scaffold271	Augustus	exon	16790	16951	.	+	.	ID=Dca27252.1.exon2;Parent=Dca27252.1
scaffold271	Augustus	exon	18189	18730	.	+	.	ID=Dca27252.1.exon3;Parent=Dca27252.1
scaffold271	Augustus	exon	18814	18924	.	+	.	ID=Dca27252.1.exon4;Parent=Dca27252.1
scaffold271	Augustus	exon	19007	19494	.	+	.	ID=Dca27252.1.exon5;Parent=Dca27252.1
scaffold271	Augus-PASA	exon	20456	20624	.	+	.	ID=Dca27252.1.exon6;Parent=Dca27252.1
scaffold271	Augus-PASA	exon	21361	21600	.	+	.	ID=Dca27252.1.exon7;Parent=Dca27252.1
scaffold271	Augus-PASA	exon	21741	21875	.	+	.	ID=Dca27252.1.exon8;Parent=Dca27252.1
scaffold271	Augus-PASA	exon	21990	22013	.	+	.	ID=Dca27252.1.exon9;Parent=Dca27252.1