Carnation DB

Dca27254.1

Annotation

5-exons
f-1
sp|F6H3A3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02390#GO:0008270#1F0P0C
sp|B9RNL9_RICCO#Ring finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0918520#GO:0008270#1F0P0C
Repeat List (scaffold271)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27254.1	1	516	522	50.38	516	48	9e-113
Target_name	Start	End	Length	Cov(%)
sp\|F6H3A3_VITVI	1	549	550	99.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27254.1	1	521	522	43.86	521	42	1e-81
Target_name	Start	End	Length	Cov(%)
AT5G24870.1	1	518	520	99.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold271	Augus-PASA	mRNA	32767	35473	.	-	.	ID=Dca27254.1;Parent=Dca27254
scaffold271	Augus-PASA	exon	32767	32910	.	-	.	ID=Dca27254.1.exon1;Parent=Dca27254.1
scaffold271	Augus-PASA	exon	33553	33699	.	-	.	ID=Dca27254.1.exon2;Parent=Dca27254.1
scaffold271	Augus-PASA	exon	33795	33893	.	-	.	ID=Dca27254.1.exon3;Parent=Dca27254.1
scaffold271	Augus-PASA	exon	34008	34058	.	-	.	ID=Dca27254.1.exon4;Parent=Dca27254.1
scaffold271	Augustus	exon	34346	35473	.	-	.	ID=Dca27254.1.exon5;Parent=Dca27254.1