Carnation DB

Dca27308.1

Annotation

7-exons
f-1
sp|B9GZK2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_415152#GO:0005634;GO:0003677;GO:0006351#1F1P1C
Os01t0147200-01 IWS1, C-terminal family protein.
Repeat List (scaffold2716)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27308.1	49	300	313	42.49	252	51	3e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9GZK2_POPTR	74	330	353	72.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27308.1	59	301	313	40.57	243	50	2e-61
Target_name	Start	End	Length	Cov(%)
Os01t0147200-01	264	511	534	46.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2716	Augustus	mRNA	16893	18414	.	+	.	ID=Dca27308.1;Parent=Dca27308
scaffold2716	Augustus	exon	16893	16985	.	+	.	ID=Dca27308.1.exon1;Parent=Dca27308.1
scaffold2716	Augustus	exon	17106	17456	.	+	.	ID=Dca27308.1.exon2;Parent=Dca27308.1
scaffold2716	Augustus	exon	17532	17672	.	+	.	ID=Dca27308.1.exon3;Parent=Dca27308.1
scaffold2716	Augustus	exon	17770	17858	.	+	.	ID=Dca27308.1.exon4;Parent=Dca27308.1
scaffold2716	Augustus	exon	17952	18011	.	+	.	ID=Dca27308.1.exon5;Parent=Dca27308.1
scaffold2716	Augustus	exon	18097	18235	.	+	.	ID=Dca27308.1.exon6;Parent=Dca27308.1
scaffold2716	Augustus	exon	18346	18414	.	+	.	ID=Dca27308.1.exon7;Parent=Dca27308.1