Dca27324.1
Annotation
- 4-exons
- f-1
- sp|G8Z279_SOLLC#Hop-interacting protein THI113#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
- Repeat List (scaffold2718)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27324.1 |
29 |
308 |
309 |
44.98 |
280 |
47 |
8e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G8Z279_SOLLC |
56 |
323 |
324 |
82.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27324.1 |
41 |
307 |
309 |
38.18 |
267 |
44 |
4e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0104400-03 |
27 |
266 |
269 |
89.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2718 |
Augus-PASA |
mRNA |
18292 |
20566 |
. |
+ |
. |
ID=Dca27324.1;Parent=Dca27324 |
| scaffold2718 |
Augus-PASA |
exon |
18292 |
18864 |
. |
+ |
. |
ID=Dca27324.1.exon1;Parent=Dca27324.1 |
| scaffold2718 |
Augus-PASA |
exon |
19547 |
19666 |
. |
+ |
. |
ID=Dca27324.1.exon2;Parent=Dca27324.1 |
| scaffold2718 |
Augus-PASA |
exon |
20209 |
20443 |
. |
+ |
. |
ID=Dca27324.1.exon3;Parent=Dca27324.1 |
| scaffold2718 |
Augus-PASA |
exon |
20535 |
20566 |
. |
+ |
. |
ID=Dca27324.1.exon4;Parent=Dca27324.1 |
