Dca27325.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2718)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27325.1 |
476 |
556 |
637 |
4.55 |
81 |
36 |
7e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
1264 |
1344 |
1449 |
5.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27325.1 |
11 |
277 |
637 |
13.97 |
267 |
33 |
3e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
309 |
578 |
857 |
31.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2718 |
Augustus |
mRNA |
30088 |
32244 |
. |
- |
. |
ID=Dca27325.1;Parent=Dca27325 |
| scaffold2718 |
Augustus |
exon |
30088 |
31301 |
. |
- |
. |
ID=Dca27325.1.exon1;Parent=Dca27325.1 |
| scaffold2718 |
Augustus |
exon |
31545 |
32244 |
. |
- |
. |
ID=Dca27325.1.exon2;Parent=Dca27325.1 |
