Carnation DB

Dca27347.1

Annotation

5-exons
f-1
sp|D7TRI8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0187g00240#unknown#0F0P0C
Os08t0502800-01 SWIB/MDM2 domain containing protein.
Repeat List (scaffold272)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27347.1	1	407	407	44.47	407	44	8e-78
Target_name	Start	End	Length	Cov(%)
sp\|D7TRI8_VITVI	1	344	344	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27347.1	167	228	407	5.4	62	36	2e-08
Target_name	Start	End	Length	Cov(%)
Os08t0502800-01	339	400	407	15.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold272	Augustus	mRNA	115933	120413	.	-	.	ID=Dca27347.1;Parent=Dca27347
scaffold272	Augustus	exon	115933	116055	.	-	.	ID=Dca27347.1.exon1;Parent=Dca27347.1
scaffold272	Augus-PASA	exon	116958	117358	.	-	.	ID=Dca27347.1.exon2;Parent=Dca27347.1
scaffold272	Augus-PASA	exon	117447	117618	.	-	.	ID=Dca27347.1.exon3;Parent=Dca27347.1
scaffold272	Augus-PASA	exon	117720	117825	.	-	.	ID=Dca27347.1.exon4;Parent=Dca27347.1
scaffold272	Augus-PASA	exon	119992	120413	.	-	.	ID=Dca27347.1.exon5;Parent=Dca27347.1