Dca27397.1
Annotation
- 2-exons
- f-1
- sp|A5BE46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025855#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold27265)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27397.1 |
1 |
293 |
293 |
84.64 |
293 |
77 |
7e-148
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BE46_VITVI |
429 |
752 |
1356 |
23.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27397.1 |
4 |
281 |
293 |
35.49 |
278 |
33 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
492 |
802 |
1428 |
21.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold27265 |
Augustus |
mRNA |
312 |
1293 |
. |
+ |
. |
ID=Dca27397.1;Parent=Dca27397 |
| scaffold27265 |
Augustus |
exon |
312 |
869 |
. |
+ |
. |
ID=Dca27397.1.exon1;Parent=Dca27397.1 |
| scaffold27265 |
Augustus |
exon |
970 |
1293 |
. |
+ |
. |
ID=Dca27397.1.exon2;Parent=Dca27397.1 |
