Dca2746.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10972)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2746.1 |
3 |
257 |
266 |
70.3 |
255 |
67 |
3e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
694 |
973 |
1501 |
18.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2746.1 |
5 |
257 |
266 |
40.22 |
253 |
39 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
722 |
998 |
1539 |
17.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10972 |
Augustus |
mRNA |
16487 |
17362 |
. |
+ |
. |
ID=Dca2746.1;Parent=Dca2746 |
| scaffold10972 |
Augustus |
exon |
16487 |
16818 |
. |
+ |
. |
ID=Dca2746.1.exon1;Parent=Dca2746.1 |
| scaffold10972 |
Augustus |
exon |
16894 |
17362 |
. |
+ |
. |
ID=Dca2746.1.exon2;Parent=Dca2746.1 |
