Dca27473.1
Annotation
- 4-exons
- f-1
- sp|D7KQ53_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_470115#GO:0016021;GO:0005215;GO:0055085;GO:0006833#1F2P1C
- AT4G00430.1 | Symbols: TMP-C, PIP1;4, PIP1E | plasma membrane intrinsic protein 1;4 | chr4:186143-187531 REVERSE LENGTH=287
- Repeat List (scaffold2733)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27473.1 |
1 |
63 |
78 |
39.74 |
63 |
50 |
6e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PI68_POPTR |
1 |
63 |
63 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27473.1 |
1 |
284 |
284 |
91.9 |
284 |
92 |
4e-153
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G00430.1 |
1 |
286 |
287 |
99.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2733 |
Augustus |
mRNA |
26719 |
28810 |
. |
- |
. |
ID=Dca27473.1;Parent=Dca27473 |
| scaffold2733 |
Augustus |
exon |
26719 |
26811 |
. |
- |
. |
ID=Dca27473.1.exon1;Parent=Dca27473.1 |
| scaffold2733 |
Augustus |
exon |
27382 |
27522 |
. |
- |
. |
ID=Dca27473.1.exon2;Parent=Dca27473.1 |
| scaffold2733 |
Augustus |
exon |
28084 |
28379 |
. |
- |
. |
ID=Dca27473.1.exon3;Parent=Dca27473.1 |
| scaffold2733 |
Augustus |
exon |
28486 |
28810 |
. |
- |
. |
ID=Dca27473.1.exon4;Parent=Dca27473.1 |
