Dca27486.1
Annotation
- 3-exons
- f-1
- sp|A5AN44_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_042581#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- sp|Q0ZCD0_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold2737)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27486.1 |
1 |
531 |
532 |
56.01 |
531 |
48 |
9e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AN44_VITVI |
777 |
1398 |
1489 |
41.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27486.1 |
1 |
340 |
532 |
23.3 |
340 |
36 |
2e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
662 |
1003 |
1539 |
22.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2737 |
Augustus |
mRNA |
3594 |
5698 |
. |
+ |
. |
ID=Dca27486.1;Parent=Dca27486 |
| scaffold2737 |
Augustus |
exon |
3594 |
4844 |
. |
+ |
. |
ID=Dca27486.1.exon1;Parent=Dca27486.1 |
| scaffold2737 |
Augustus |
exon |
5152 |
5371 |
. |
+ |
. |
ID=Dca27486.1.exon2;Parent=Dca27486.1 |
| scaffold2737 |
Augustus |
exon |
5571 |
5698 |
. |
+ |
. |
ID=Dca27486.1.exon3;Parent=Dca27486.1 |
