Carnation DB

Dca275.1

Annotation

9-exons
f-1
sp|B9HJN9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766264#GO:0005524;GO:0004003;GO:0003677#3F0P0C
Os04t0599650-00 DNA helicase, UvrD/REP type domain containing protein.
Repeat List (scaffold100)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca275.1	41	1120	1135	47.48	1080	49	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HJN9_POPTR	529	1625	1950	56.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca275.1	91	1132	1135	40.08	1042	43	0
Target_name	Start	End	Length	Cov(%)
Os04t0599650-00	524	1544	2521	40.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold100	Augustus	mRNA	262881	269346	.	-	.	ID=Dca275.1;Parent=Dca275
scaffold100	Augustus	exon	262881	263174	.	-	.	ID=Dca275.1.exon1;Parent=Dca275.1
scaffold100	Augustus	exon	263257	263607	.	-	.	ID=Dca275.1.exon2;Parent=Dca275.1
scaffold100	Augustus	exon	263697	264879	.	-	.	ID=Dca275.1.exon3;Parent=Dca275.1
scaffold100	Augustus	exon	265088	265591	.	-	.	ID=Dca275.1.exon4;Parent=Dca275.1
scaffold100	Augustus	exon	265823	266178	.	-	.	ID=Dca275.1.exon5;Parent=Dca275.1
scaffold100	Augustus	exon	266427	266643	.	-	.	ID=Dca275.1.exon6;Parent=Dca275.1
scaffold100	Augustus	exon	266742	266988	.	-	.	ID=Dca275.1.exon7;Parent=Dca275.1
scaffold100	Augustus	exon	267200	267359	.	-	.	ID=Dca275.1.exon8;Parent=Dca275.1
scaffold100	Augustus	exon	269251	269346	.	-	.	ID=Dca275.1.exon9;Parent=Dca275.1