Dca27550.1
Annotation
- 3-exons
- f-1
- sp|D7L721_ARALL#Exopolygalacturonase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478122#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold2744)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27550.1 |
1 |
350 |
356 |
61.79 |
350 |
63 |
2e-124
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L721_ARALL |
94 |
441 |
449 |
77.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27550.1 |
15 |
350 |
356 |
59.83 |
336 |
64 |
6e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
102 |
437 |
445 |
75.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2744 |
Augustus |
mRNA |
13393 |
14724 |
. |
- |
. |
ID=Dca27550.1;Parent=Dca27550 |
| scaffold2744 |
Augustus |
exon |
13393 |
13629 |
. |
- |
. |
ID=Dca27550.1.exon1;Parent=Dca27550.1 |
| scaffold2744 |
Augustus |
exon |
13763 |
14278 |
. |
- |
. |
ID=Dca27550.1.exon2;Parent=Dca27550.1 |
| scaffold2744 |
Augustus |
exon |
14407 |
14724 |
. |
- |
. |
ID=Dca27550.1.exon3;Parent=Dca27550.1 |
