Dca27595.1
Annotation
- 4-exons
- f-1
- sp|B9MXH9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_593864#GO:0003676;GO:0008270#2F0P0C
- AT1G19860.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:6891654-6894400 REVERSE LENGTH=413
- Repeat List (scaffold275)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27595.1 |
12 |
479 |
484 |
39.46 |
468 |
36 |
2e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MXH9_POPTR |
9 |
531 |
536 |
97.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27595.1 |
373 |
479 |
484 |
8.26 |
107 |
34 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G19860.1 |
293 |
413 |
413 |
29.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold275 |
Augustus |
mRNA |
16304 |
21184 |
. |
+ |
. |
ID=Dca27595.1;Parent=Dca27595 |
| scaffold275 |
Augustus |
exon |
16304 |
16372 |
. |
+ |
. |
ID=Dca27595.1.exon1;Parent=Dca27595.1 |
| scaffold275 |
Augustus |
exon |
19045 |
19239 |
. |
+ |
. |
ID=Dca27595.1.exon2;Parent=Dca27595.1 |
| scaffold275 |
Augustus |
exon |
19582 |
19706 |
. |
+ |
. |
ID=Dca27595.1.exon3;Parent=Dca27595.1 |
| scaffold275 |
Augustus |
exon |
20119 |
21184 |
. |
+ |
. |
ID=Dca27595.1.exon4;Parent=Dca27595.1 |
