Carnation DB

Dca27598.1

Annotation

5-exons
f-1
sp|A3CFV5_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_35559#GO:0008565#1F0P0C
Os12t0207300-01 Similar to Clathrin coat assembly protein AP17 (Clathrin coat associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (HA2 17 kDa subunit) (Clathrin assembly protein 2 small chain).
Repeat List (scaffold275)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27598.1	1	141	141	98.58	141	99	3e-76
Target_name	Start	End	Length	Cov(%)
sp\|A3CFV5_ORYSJ	11	151	151	93.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27598.1	1	141	141	98.58	141	99	4e-77
Target_name	Start	End	Length	Cov(%)
Os12t0207300-01	2	142	143	98.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold275	Augustus	mRNA	38836	40902	.	+	.	ID=Dca27598.1;Parent=Dca27598
scaffold275	Augustus	exon	38836	38934	.	+	.	ID=Dca27598.1.exon1;Parent=Dca27598.1
scaffold275	Augus-PASA	exon	39048	39098	.	+	.	ID=Dca27598.1.exon2;Parent=Dca27598.1
scaffold275	Augus-PASA	exon	40194	40367	.	+	.	ID=Dca27598.1.exon3;Parent=Dca27598.1
scaffold275	Augus-PASA	exon	40685	40744	.	+	.	ID=Dca27598.1.exon4;Parent=Dca27598.1
scaffold275	Augus-PASA	exon	40861	40902	.	+	.	ID=Dca27598.1.exon5;Parent=Dca27598.1