Carnation DB

Dca2771.1

Annotation

5-exons
f-1
sp|D7T7A5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04910#GO:0005634;GO:0003677;GO:0006310;GO:0006302#1F2P1C
sp|B9RTD9_RICCO#DNA-repair protein XRCC4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0908820#GO:0005634;GO:0003677;GO:0006310;GO:0006302#1F2P1C
Repeat List (scaffold1099)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2771.1	15	236	244	57.37	222	64	2e-79
Target_name	Start	End	Length	Cov(%)
sp\|D7T7A5_VITVI	6	221	258	83.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2771.1	15	211	244	49.18	197	61	2e-67
Target_name	Start	End	Length	Cov(%)
AT3G23100.1	24	213	264	71.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1099	Augustus	mRNA	48640	50831	.	-	.	ID=Dca2771.1;Parent=Dca2771
scaffold1099	Augustus	exon	48640	48795	.	-	.	ID=Dca2771.1.exon1;Parent=Dca2771.1
scaffold1099	Augustus	exon	48957	49079	.	-	.	ID=Dca2771.1.exon2;Parent=Dca2771.1
scaffold1099	Augustus	exon	49166	49294	.	-	.	ID=Dca2771.1.exon3;Parent=Dca2771.1
scaffold1099	Augustus	exon	50154	50296	.	-	.	ID=Dca2771.1.exon4;Parent=Dca2771.1
scaffold1099	Augustus	exon	50648	50831	.	-	.	ID=Dca2771.1.exon5;Parent=Dca2771.1