Dca27788.1
Annotation
- 2-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold277)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27788.1 |
4 |
587 |
604 |
40.39 |
584 |
41 |
1e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
375 |
971 |
1365 |
43.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27788.1 |
76 |
558 |
604 |
27.64 |
483 |
33 |
5e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
350 |
850 |
857 |
58.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold277 |
Augustus |
mRNA |
10966 |
13614 |
. |
+ |
. |
ID=Dca27788.1;Parent=Dca27788 |
| scaffold277 |
Augustus |
exon |
10966 |
11534 |
. |
+ |
. |
ID=Dca27788.1.exon1;Parent=Dca27788.1 |
| scaffold277 |
Augustus |
exon |
12369 |
13614 |
. |
+ |
. |
ID=Dca27788.1.exon2;Parent=Dca27788.1 |
