Carnation DB

Dca27810.1

Annotation

6-exons
f-1
sp|D5ABJ1_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0016881#1F0P0C
sp|D8SK34_SELML#Ubiquitin-conjugating enzyme 1, E2#Selaginella moellendorffii (Spikemoss)#ORFNames=SELMODRAFT_185331, SELMODRAFT_450631#GO:0016881#1F0P0C
Repeat List (scaffold277)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27810.1	6	155	157	78.98	150	83	6e-71
Target_name	Start	End	Length	Cov(%)
sp\|D5ABJ1_PICSI	2	151	153	98.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27810.1	6	153	157	50.95	148	55	2e-47
Target_name	Start	End	Length	Cov(%)
Os05t0182500-02	2	148	153	96.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold277	Augustus	mRNA	183857	187376	.	+	.	ID=Dca27810.1;Parent=Dca27810
scaffold277	Augustus	exon	183857	183934	.	+	.	ID=Dca27810.1.exon1;Parent=Dca27810.1
scaffold277	Augustus	exon	184073	184157	.	+	.	ID=Dca27810.1.exon2;Parent=Dca27810.1
scaffold277	Augustus	exon	186742	186834	.	+	.	ID=Dca27810.1.exon3;Parent=Dca27810.1
scaffold277	Augustus	exon	186971	187059	.	+	.	ID=Dca27810.1.exon4;Parent=Dca27810.1
scaffold277	Augustus	exon	187156	187241	.	+	.	ID=Dca27810.1.exon5;Parent=Dca27810.1
scaffold277	Augustus	exon	187334	187376	.	+	.	ID=Dca27810.1.exon6;Parent=Dca27810.1