Dca27812.1
Annotation
- 3-exons
- f-1
- sp|Q10IB2_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g35940#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2770)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27812.1 |
233 |
464 |
468 |
28.41 |
232 |
55 |
1e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10IB2_ORYSJ |
402 |
647 |
649 |
37.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2770 |
Augustus |
mRNA |
651 |
4376 |
. |
+ |
. |
ID=Dca27812.1;Parent=Dca27812 |
| scaffold2770 |
Augustus |
exon |
651 |
1403 |
. |
+ |
. |
ID=Dca27812.1.exon1;Parent=Dca27812.1 |
| scaffold2770 |
Augustus |
exon |
3551 |
3978 |
. |
+ |
. |
ID=Dca27812.1.exon2;Parent=Dca27812.1 |
| scaffold2770 |
Augustus |
exon |
4151 |
4376 |
. |
+ |
. |
ID=Dca27812.1.exon3;Parent=Dca27812.1 |
