Dca27889.1
Annotation
- 4-exons
- f-1
- sp|B9HSX3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_658105#unknown#0F0P0C
- Repeat List (scaffold278)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27889.1 |
1 |
213 |
268 |
36.56 |
213 |
47 |
3e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HSX3_POPTR |
34 |
222 |
228 |
82.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27889.1 |
13 |
210 |
268 |
27.61 |
198 |
37 |
6e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G13540.1 |
37 |
196 |
210 |
76.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold278 |
Augustus |
mRNA |
62031 |
67408 |
. |
- |
. |
ID=Dca27889.1;Parent=Dca27889 |
| scaffold278 |
Augustus |
exon |
62031 |
62182 |
. |
- |
. |
ID=Dca27889.1.exon1;Parent=Dca27889.1 |
| scaffold278 |
Augustus |
exon |
62299 |
62353 |
. |
- |
. |
ID=Dca27889.1.exon2;Parent=Dca27889.1 |
| scaffold278 |
Augustus |
exon |
62825 |
63009 |
. |
- |
. |
ID=Dca27889.1.exon3;Parent=Dca27889.1 |
| scaffold278 |
Augus-PASA |
exon |
66994 |
67408 |
. |
- |
. |
ID=Dca27889.1.exon4;Parent=Dca27889.1 |
