Carnation DB

Dca27911.1

Annotation

9-exons
f-1
sp|D7SMB3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0137g00760#GO:0016020;GO:0005524;GO:0000155#2F0P1C
sp|B9SVM1_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0794020#GO:0016020;GO:0005524;GO:0000155#2F0P1C
Repeat List (scaffold2782)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27911.1	10	586	599	61.1	577	61	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SMB3_VITVI	27	617	627	94.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27911.1	60	586	599	56.09	527	61	1e-177
Target_name	Start	End	Length	Cov(%)
AT1G67840.1	56	600	611	89.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2782	Augus-PASA	mRNA	2846	8793	.	+	.	ID=Dca27911.1;Parent=Dca27911
scaffold2782	Augus-PASA	exon	2846	3262	.	+	.	ID=Dca27911.1.exon1;Parent=Dca27911.1
scaffold2782	Augustus	exon	5128	5226	.	+	.	ID=Dca27911.1.exon2;Parent=Dca27911.1
scaffold2782	Augustus	exon	6441	6743	.	+	.	ID=Dca27911.1.exon3;Parent=Dca27911.1
scaffold2782	Augus-PASA	exon	7144	7209	.	+	.	ID=Dca27911.1.exon4;Parent=Dca27911.1
scaffold2782	Augus-PASA	exon	7300	7368	.	+	.	ID=Dca27911.1.exon5;Parent=Dca27911.1
scaffold2782	Augus-PASA	exon	7460	7552	.	+	.	ID=Dca27911.1.exon6;Parent=Dca27911.1
scaffold2782	Augus-PASA	exon	7629	7855	.	+	.	ID=Dca27911.1.exon7;Parent=Dca27911.1
scaffold2782	Augus-PASA	exon	7984	8257	.	+	.	ID=Dca27911.1.exon8;Parent=Dca27911.1
scaffold2782	Augus-PASA	exon	8542	8793	.	+	.	ID=Dca27911.1.exon9;Parent=Dca27911.1