Carnation DB

Dca27936.1

Annotation

5-exons
f-1
sp|B9I6L9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570664#unknown#0F0P0C
Os05t0135900-01 Spectrin repeat containing protein.
Repeat List (scaffold2785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27936.1	8	346	346	70.52	339	72	3e-133
Target_name	Start	End	Length	Cov(%)
sp\|B9I6L9_POPTR	5	344	344	98.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27936.1	13	346	346	60.69	334	63	3e-117
Target_name	Start	End	Length	Cov(%)
AT5G26770.2	2	335	335	99.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2785	Augustus	mRNA	23796	27738	.	+	.	ID=Dca27936.1;Parent=Dca27936
scaffold2785	Augustus	exon	23796	23996	.	+	.	ID=Dca27936.1.exon1;Parent=Dca27936.1
scaffold2785	Augustus	exon	24598	24705	.	+	.	ID=Dca27936.1.exon2;Parent=Dca27936.1
scaffold2785	Augustus	exon	26768	27229	.	+	.	ID=Dca27936.1.exon3;Parent=Dca27936.1
scaffold2785	Augustus	exon	27343	27444	.	+	.	ID=Dca27936.1.exon4;Parent=Dca27936.1
scaffold2785	Augustus	exon	27571	27738	.	+	.	ID=Dca27936.1.exon5;Parent=Dca27936.1