Dca27959.1
Annotation
- 3-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2789)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27959.1 |
858 |
1190 |
1313 |
15.07 |
333 |
60 |
8e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
1270 |
1601 |
1788 |
18.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27959.1 |
171 |
835 |
1313 |
16.45 |
665 |
33 |
5e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
1195 |
1539 |
40.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2789 |
Augustus |
mRNA |
42402 |
46506 |
. |
- |
. |
ID=Dca27959.1;Parent=Dca27959 |
| scaffold2789 |
Augustus |
exon |
42402 |
42595 |
. |
- |
. |
ID=Dca27959.1.exon1;Parent=Dca27959.1 |
| scaffold2789 |
Augustus |
exon |
42677 |
43919 |
. |
- |
. |
ID=Dca27959.1.exon2;Parent=Dca27959.1 |
| scaffold2789 |
Augustus |
exon |
44002 |
46506 |
. |
- |
. |
ID=Dca27959.1.exon3;Parent=Dca27959.1 |
