Dca27988.1
Annotation
- 2-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold279)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27988.1 |
157 |
298 |
307 |
29.96 |
142 |
65 |
4e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
1300 |
1441 |
1501 |
9.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27988.1 |
160 |
298 |
307 |
20.19 |
139 |
45 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
402 |
540 |
1262 |
11.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold279 |
Augustus |
mRNA |
186893 |
192513 |
. |
+ |
. |
ID=Dca27988.1;Parent=Dca27988 |
| scaffold279 |
Augustus |
exon |
186893 |
187378 |
. |
+ |
. |
ID=Dca27988.1.exon1;Parent=Dca27988.1 |
| scaffold279 |
Augustus |
exon |
192076 |
192513 |
. |
+ |
. |
ID=Dca27988.1.exon2;Parent=Dca27988.1 |
