Carnation DB

Dca28.1

Annotation

7-exons
f-1
sp|F6I6F9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g00160#unknown#0F0P0C
Os03t0115400-01 WD40 repeat-like domain containing protein.
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28.1	1	732	733	59.75	732	58	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I6F9_VITVI	1	751	752	99.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28.1	39	733	733	43.51	695	45	1e-162
Target_name	Start	End	Length	Cov(%)
Os03t0115400-01	44	746	747	94.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augus-PASA	mRNA	314889	317912	.	+	.	ID=Dca28.1;Parent=Dca28
scaffold1	Augus-PASA	exon	314889	316019	.	+	.	ID=Dca28.1.exon1;Parent=Dca28.1
scaffold1	Augus-PASA	exon	316238	316328	.	+	.	ID=Dca28.1.exon2;Parent=Dca28.1
scaffold1	Augus-PASA	exon	316424	316581	.	+	.	ID=Dca28.1.exon3;Parent=Dca28.1
scaffold1	Augus-PASA	exon	316675	316726	.	+	.	ID=Dca28.1.exon4;Parent=Dca28.1
scaffold1	Augus-PASA	exon	316960	317039	.	+	.	ID=Dca28.1.exon5;Parent=Dca28.1
scaffold1	Augus-PASA	exon	317137	317230	.	+	.	ID=Dca28.1.exon6;Parent=Dca28.1
scaffold1	Augus-PASA	exon	317317	317912	.	+	.	ID=Dca28.1.exon7;Parent=Dca28.1