Carnation DB

Dca28014.1

Annotation

5-exons
f-1
sp|B9HQQ0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_768461#unknown#0F0P0C
Repeat List (scaffold2795)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28014.1	45	101	116	30.17	57	62	2e-13
Target_name	Start	End	Length	Cov(%)
sp\|B9HQQ0_POPTR	1	57	156	36.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28014.1	45	116	116	30.17	72	47	3e-12
Target_name	Start	End	Length	Cov(%)
Os03t0205150-01	10	85	89	85.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2795	Augus-PASA	mRNA	28366	31037	.	-	.	ID=Dca28014.1;Parent=Dca28014
scaffold2795	Augus-PASA	exon	28366	28413	.	-	.	ID=Dca28014.1.exon1;Parent=Dca28014.1
scaffold2795	Augus-PASA	exon	29181	29246	.	-	.	ID=Dca28014.1.exon2;Parent=Dca28014.1
scaffold2795	Augus-PASA	exon	29558	29630	.	-	.	ID=Dca28014.1.exon3;Parent=Dca28014.1
scaffold2795	Augus-PASA	exon	29741	29783	.	-	.	ID=Dca28014.1.exon4;Parent=Dca28014.1
scaffold2795	Augus-PASA	exon	30917	31037	.	-	.	ID=Dca28014.1.exon5;Parent=Dca28014.1