Carnation DB

Dca2809.1

Annotation

22-exons
f-1
sp|F6I0J7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g00170#GO:0005524;GO:0030983;GO:0006298#2F1P0C
sp|G7K187_MEDTR#MutL DNA mismatch repair protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g024250#GO:0005524;GO:0030983;GO:0006298#2F1P0C
Repeat List (scaffold11)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2809.1	1	421	1204	17.6	421	42	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|F6I0J7_VITVI	1	498	1220	40.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2809.1	1	254	1204	11.46	254	45	3e-63
Target_name	Start	End	Length	Cov(%)
AT4G35520.1	1	313	1169	26.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11	Augustus	mRNA	165055	174290	.	+	.	ID=Dca2809.1;Parent=Dca2809
scaffold11	Augustus	exon	165055	165180	.	+	.	ID=Dca2809.1.exon1;Parent=Dca2809.1
scaffold11	Augustus	exon	165545	165596	.	+	.	ID=Dca2809.1.exon2;Parent=Dca2809.1
scaffold11	Augustus	exon	165687	165734	.	+	.	ID=Dca2809.1.exon3;Parent=Dca2809.1
scaffold11	Augustus	exon	166130	166288	.	+	.	ID=Dca2809.1.exon4;Parent=Dca2809.1
scaffold11	Augustus	exon	167204	167261	.	+	.	ID=Dca2809.1.exon5;Parent=Dca2809.1
scaffold11	Augustus	exon	167380	167472	.	+	.	ID=Dca2809.1.exon6;Parent=Dca2809.1
scaffold11	Augustus	exon	167552	167714	.	+	.	ID=Dca2809.1.exon7;Parent=Dca2809.1
scaffold11	Augustus	exon	168396	168465	.	+	.	ID=Dca2809.1.exon8;Parent=Dca2809.1
scaffold11	Augustus	exon	168549	168632	.	+	.	ID=Dca2809.1.exon9;Parent=Dca2809.1
scaffold11	Augustus	exon	168756	170555	.	+	.	ID=Dca2809.1.exon10;Parent=Dca2809.1
scaffold11	Augustus	exon	170653	170752	.	+	.	ID=Dca2809.1.exon11;Parent=Dca2809.1
scaffold11	Augustus	exon	170847	170920	.	+	.	ID=Dca2809.1.exon12;Parent=Dca2809.1
scaffold11	Augustus	exon	171196	171293	.	+	.	ID=Dca2809.1.exon13;Parent=Dca2809.1
scaffold11	Augustus	exon	171388	171436	.	+	.	ID=Dca2809.1.exon14;Parent=Dca2809.1
scaffold11	Augustus	exon	171888	171922	.	+	.	ID=Dca2809.1.exon15;Parent=Dca2809.1
scaffold11	Augustus	exon	171998	172051	.	+	.	ID=Dca2809.1.exon16;Parent=Dca2809.1
scaffold11	Augustus	exon	172160	172266	.	+	.	ID=Dca2809.1.exon17;Parent=Dca2809.1
scaffold11	Augustus	exon	172779	172827	.	+	.	ID=Dca2809.1.exon18;Parent=Dca2809.1
scaffold11	Augustus	exon	173263	173322	.	+	.	ID=Dca2809.1.exon19;Parent=Dca2809.1
scaffold11	Augustus	exon	173417	173489	.	+	.	ID=Dca2809.1.exon20;Parent=Dca2809.1
scaffold11	Augustus	exon	173928	174013	.	+	.	ID=Dca2809.1.exon21;Parent=Dca2809.1
scaffold11	Augustus	exon	174114	174290	.	+	.	ID=Dca2809.1.exon22;Parent=Dca2809.1