Dca28098.1
Annotation
- 3-exons
- f-1
- sp|B9ILX8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_262189#unknown#0F0P0C
- AT4G30200.2 | Symbols: VEL1, VIL2 | vernalization5/VIN3-like | chr4:14786852-14790070 REVERSE LENGTH=714
- Repeat List (scaffold28)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28098.1 |
7 |
589 |
589 |
48.38 |
583 |
44 |
2e-140
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9ILX8_POPTR |
1 |
582 |
582 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28098.1 |
282 |
589 |
589 |
18.5 |
308 |
35 |
8e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G30200.2 |
445 |
714 |
714 |
37.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold28 |
Augustus |
mRNA |
468302 |
470916 |
. |
+ |
. |
ID=Dca28098.1;Parent=Dca28098 |
| scaffold28 |
Augustus |
exon |
468302 |
468969 |
. |
+ |
. |
ID=Dca28098.1.exon1;Parent=Dca28098.1 |
| scaffold28 |
Augustus |
exon |
469250 |
469542 |
. |
+ |
. |
ID=Dca28098.1.exon2;Parent=Dca28098.1 |
| scaffold28 |
Augustus |
exon |
470108 |
470916 |
. |
+ |
. |
ID=Dca28098.1.exon3;Parent=Dca28098.1 |
