Carnation DB

Dca2811.1

Annotation

7-exons
f-1
sp|B9T6Q8_RICCO#Protein binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0145120#GO:0008270#1F0P0C
Repeat List (scaffold11)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2811.1	5	342	342	73.97	338	75	6e-144
Target_name	Start	End	Length	Cov(%)
sp\|B9T6Q8_RICCO	3	321	321	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2811.1	7	342	342	73.09	336	75	5e-143
Target_name	Start	End	Length	Cov(%)
AT2G22120.2	6	324	363	87.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11	Augus-PASA	mRNA	177750	181083	.	+	.	ID=Dca2811.1;Parent=Dca2811
scaffold11	Augus-PASA	exon	177750	177876	.	+	.	ID=Dca2811.1.exon1;Parent=Dca2811.1
scaffold11	Augus-PASA	exon	178463	178548	.	+	.	ID=Dca2811.1.exon2;Parent=Dca2811.1
scaffold11	Augus-PASA	exon	179145	179291	.	+	.	ID=Dca2811.1.exon3;Parent=Dca2811.1
scaffold11	Augus-PASA	exon	179385	179493	.	+	.	ID=Dca2811.1.exon4;Parent=Dca2811.1
scaffold11	Augus-PASA	exon	179919	180042	.	+	.	ID=Dca2811.1.exon5;Parent=Dca2811.1
scaffold11	Augus-PASA	exon	180222	180549	.	+	.	ID=Dca2811.1.exon6;Parent=Dca2811.1
scaffold11	Augus-PASA	exon	180976	181083	.	+	.	ID=Dca2811.1.exon7;Parent=Dca2811.1