Carnation DB

Dca2812.1

Annotation

11-exons
f-1
sp|B9SSL9_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0985500#GO:0031305#0F0P1C
AT4G39690.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane protein Mitofilin (InterPro:IPR019133); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:18417755-18421633 FORWARD LENGTH=650
Repeat List (scaffold11)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2812.1	225	618	618	39.96	394	63	2e-131
Target_name	Start	End	Length	Cov(%)
sp\|B9SSL9_RICCO	266	637	638	58.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2812.1	290	618	618	35.92	329	68	6e-121
Target_name	Start	End	Length	Cov(%)
AT4G39690.1	322	650	650	50.61

seqname	source	feature	start	end	score	strand	frame	group
scaffold11	Augustus	mRNA	189662	197313	.	+	.	ID=Dca2812.1;Parent=Dca2812
scaffold11	Augustus	exon	189662	189727	.	+	.	ID=Dca2812.1.exon1;Parent=Dca2812.1
scaffold11	Augustus	exon	192133	192717	.	+	.	ID=Dca2812.1.exon2;Parent=Dca2812.1
scaffold11	Augustus	exon	193605	193801	.	+	.	ID=Dca2812.1.exon3;Parent=Dca2812.1
scaffold11	Augustus	exon	193894	194017	.	+	.	ID=Dca2812.1.exon4;Parent=Dca2812.1
scaffold11	Augustus	exon	194202	194279	.	+	.	ID=Dca2812.1.exon5;Parent=Dca2812.1
scaffold11	Augustus	exon	194903	194995	.	+	.	ID=Dca2812.1.exon6;Parent=Dca2812.1
scaffold11	Augustus	exon	195082	195201	.	+	.	ID=Dca2812.1.exon7;Parent=Dca2812.1
scaffold11	Augus-PASA	exon	195736	195813	.	+	.	ID=Dca2812.1.exon8;Parent=Dca2812.1
scaffold11	Augus-PASA	exon	195962	196141	.	+	.	ID=Dca2812.1.exon9;Parent=Dca2812.1
scaffold11	Augus-PASA	exon	196634	196735	.	+	.	ID=Dca2812.1.exon10;Parent=Dca2812.1
scaffold11	Augus-PASA	exon	197080	197313	.	+	.	ID=Dca2812.1.exon11;Parent=Dca2812.1