Dca28122.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold280)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28122.1 |
1 |
653 |
653 |
66.3 |
653 |
63 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
465 |
1152 |
1333 |
51.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28122.1 |
1 |
653 |
653 |
46.4 |
653 |
42 |
3e-166
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
515 |
1247 |
1428 |
51.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold280 |
Augustus |
mRNA |
181664 |
183728 |
. |
+ |
. |
ID=Dca28122.1;Parent=Dca28122 |
| scaffold280 |
Augustus |
exon |
181664 |
182758 |
. |
+ |
. |
ID=Dca28122.1.exon1;Parent=Dca28122.1 |
| scaffold280 |
Augustus |
exon |
182862 |
183728 |
. |
+ |
. |
ID=Dca28122.1.exon2;Parent=Dca28122.1 |
