Dca28146.1
Annotation
- 3-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2803)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28146.1 |
59 |
277 |
281 |
50.88 |
219 |
66 |
3e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
508 |
726 |
764 |
28.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28146.1 |
28 |
281 |
281 |
28.46 |
254 |
32 |
5e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
569 |
818 |
1539 |
16.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2803 |
Augustus |
mRNA |
35073 |
36144 |
. |
- |
. |
ID=Dca28146.1;Parent=Dca28146 |
| scaffold2803 |
Augustus |
exon |
35073 |
35743 |
. |
- |
. |
ID=Dca28146.1.exon1;Parent=Dca28146.1 |
| scaffold2803 |
Augustus |
exon |
35873 |
35946 |
. |
- |
. |
ID=Dca28146.1.exon2;Parent=Dca28146.1 |
| scaffold2803 |
Augustus |
exon |
36044 |
36144 |
. |
- |
. |
ID=Dca28146.1.exon3;Parent=Dca28146.1 |
