Dca28149.1
Annotation
- 4-exons
- f-1
- sp|D7L1B0_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_477638#GO:0045454#0F1P0C
- AT3G03860.1 | Symbols: ATAPRL5, APRL5 | APR-like 5 | chr3:992465-994315 FORWARD LENGTH=300
- Repeat List (scaffold28035)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28149.1 |
10 |
163 |
279 |
22.93 |
154 |
42 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L1B0_ARALL |
5 |
159 |
300 |
51.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28149.1 |
10 |
185 |
279 |
24.73 |
176 |
38 |
3e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G03860.1 |
5 |
190 |
300 |
62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold28035 |
Augustus |
mRNA |
609 |
5150 |
. |
+ |
. |
ID=Dca28149.1;Parent=Dca28149 |
| scaffold28035 |
Augustus |
exon |
609 |
794 |
. |
+ |
. |
ID=Dca28149.1.exon1;Parent=Dca28149.1 |
| scaffold28035 |
Augustus |
exon |
1085 |
1266 |
. |
+ |
. |
ID=Dca28149.1.exon2;Parent=Dca28149.1 |
| scaffold28035 |
Augustus |
exon |
1839 |
1958 |
. |
+ |
. |
ID=Dca28149.1.exon3;Parent=Dca28149.1 |
| scaffold28035 |
Augustus |
exon |
4799 |
5150 |
. |
+ |
. |
ID=Dca28149.1.exon4;Parent=Dca28149.1 |
