Carnation DB

Dca28201.1

Annotation

8-exons
f-1
sp|B9GWA9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_647251#GO:0000166;GO:0003723;GO:0008270#3F0P0C
Os07t0682400-03 Nucleotide-binding, alpha-beta plait domain containing protein.
Repeat List (scaffold281)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28201.1	1	447	447	55.48	447	50	2e-114
Target_name	Start	End	Length	Cov(%)
sp\|B9GWA9_POPTR	186	667	680	70.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28201.1	2	447	447	48.76	446	44	3e-87
Target_name	Start	End	Length	Cov(%)
Os07t0682400-03	213	682	683	68.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold281	Augustus	mRNA	47812	51009	.	-	.	ID=Dca28201.1;Parent=Dca28201
scaffold281	Augustus	exon	47812	47845	.	-	.	ID=Dca28201.1.exon1;Parent=Dca28201.1
scaffold281	Augustus	exon	47944	48132	.	-	.	ID=Dca28201.1.exon2;Parent=Dca28201.1
scaffold281	Augustus	exon	48390	48531	.	-	.	ID=Dca28201.1.exon3;Parent=Dca28201.1
scaffold281	Augustus	exon	48628	48831	.	-	.	ID=Dca28201.1.exon4;Parent=Dca28201.1
scaffold281	Augustus	exon	49065	49156	.	-	.	ID=Dca28201.1.exon5;Parent=Dca28201.1
scaffold281	Augustus	exon	49427	49606	.	-	.	ID=Dca28201.1.exon6;Parent=Dca28201.1
scaffold281	Augustus	exon	49917	50084	.	-	.	ID=Dca28201.1.exon7;Parent=Dca28201.1
scaffold281	Augustus	exon	50675	51009	.	-	.	ID=Dca28201.1.exon8;Parent=Dca28201.1