Dca28286.1
Annotation
- 3-exons
- f-1
- sp|B9IA24_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1099412#GO:0008270#1F0P0C
- AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:21716920-21717908 REVERSE LENGTH=266
- Repeat List (scaffold2818)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28286.1 |
117 |
267 |
268 |
26.11 |
151 |
45 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IA24_POPTR |
117 |
263 |
268 |
54.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28286.1 |
100 |
268 |
268 |
27.61 |
169 |
43 |
5e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G58720.2 |
91 |
262 |
266 |
64.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2818 |
Augustus |
mRNA |
29695 |
30802 |
. |
+ |
. |
ID=Dca28286.1;Parent=Dca28286 |
| scaffold2818 |
Augustus |
exon |
29695 |
29823 |
. |
+ |
. |
ID=Dca28286.1.exon1;Parent=Dca28286.1 |
| scaffold2818 |
Augustus |
exon |
29910 |
30004 |
. |
+ |
. |
ID=Dca28286.1.exon2;Parent=Dca28286.1 |
| scaffold2818 |
Augustus |
exon |
30220 |
30802 |
. |
+ |
. |
ID=Dca28286.1.exon3;Parent=Dca28286.1 |
