Carnation DB

Dca28309.1

Annotation

6-exons
f-1
sp|B9S0N2_RICCO#Syntaxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1356980#GO:0016020;GO:0005484;GO:0006886#1F1P1C
Repeat List (scaffold282)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28309.1	305	439	439	21.86	135	56	6e-40
Target_name	Start	End	Length	Cov(%)
sp\|B9S0N2_RICCO	93	266	266	65.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28309.1	305	438	439	21.41	134	54	5e-38
Target_name	Start	End	Length	Cov(%)
AT3G09740.1	93	266	266	65.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold282	Augustus	mRNA	69613	75712	.	+	.	ID=Dca28309.1;Parent=Dca28309
scaffold282	Augustus	exon	69613	70530	.	+	.	ID=Dca28309.1.exon1;Parent=Dca28309.1
scaffold282	Augustus	exon	74300	74500	.	+	.	ID=Dca28309.1.exon2;Parent=Dca28309.1
scaffold282	Augustus	exon	74937	74981	.	+	.	ID=Dca28309.1.exon3;Parent=Dca28309.1
scaffold282	Augustus	exon	75068	75130	.	+	.	ID=Dca28309.1.exon4;Parent=Dca28309.1
scaffold282	Augustus	exon	75226	75302	.	+	.	ID=Dca28309.1.exon5;Parent=Dca28309.1
scaffold282	Augustus	exon	75697	75712	.	+	.	ID=Dca28309.1.exon6;Parent=Dca28309.1