Dca28317.1
Annotation
- 3-exons
- f-1
- sp|B9IP74_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573677#GO:0005524;GO:0003677;GO:0017111;GO:0006260#3F1P0C
- sp|B9SIK6_RICCO#Minichromosome maintenance protein MCM, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0821870#GO:0005524;GO:0003677;GO:0017111;GO:0006260#3F1P0C
- Repeat List (scaffold282)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28317.1 |
11 |
193 |
196 |
51.02 |
183 |
55 |
8e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IP74_POPTR |
68 |
250 |
738 |
24.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28317.1 |
47 |
193 |
196 |
46.93 |
147 |
62 |
3e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G14050.1 |
99 |
246 |
646 |
22.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold282 |
Augustus |
mRNA |
178288 |
179650 |
. |
- |
. |
ID=Dca28317.1;Parent=Dca28317 |
| scaffold282 |
Augustus |
exon |
178288 |
178694 |
. |
- |
. |
ID=Dca28317.1.exon1;Parent=Dca28317.1 |
| scaffold282 |
Augustus |
exon |
179214 |
179313 |
. |
- |
. |
ID=Dca28317.1.exon2;Parent=Dca28317.1 |
| scaffold282 |
Augustus |
exon |
179567 |
179650 |
. |
- |
. |
ID=Dca28317.1.exon3;Parent=Dca28317.1 |
